Diagnosis of Prader-Willi Syndrome
Prader-Willi syndrome (PWS) is a contiguous gene syndrome resulting from abnormal DNA methylation within the Prader-Willi critical region (PWCR) on chromosome 15q11.2–q13. Diagnosis and identification of the underlying molecular mechanism in an affected individual (proband) can be effectively achieved through simultaneous DNA methylation analysis and oligo-SNP array (OSA).
DNA methylation analysis detects the presence of maternal-only imprinting at the PWCR, which is a hallmark of PWS.
The OSA provides additional insight by identifying the specific genetic subtype—such as a 15q11.2–q13 deletion, an imprinting center deletion, or cases of uniparental isodisomy and segmental isodisomy.
In individuals who show maternal-only imprinting on DNA methylation analysis but have a normal OSA result, further investigation with DNA polymorphism analysis can help distinguish between uniparental heterodisomy and an epimutation-driven imprinting defect.